SNP Detail For rs6941421
1.Mapping Information
Human SNP ID rs6941421
Human chromosome chr6
Human SNP position 15088920
Pig chromosome chr7
Pig SNP position 11823327
2.Annotation Information
PubMed ID19010793
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19010793
StudyGenome-wide association analysis of susceptibility and clinical phenotype in multiple sclerosis.
Disease/TraitMultiple sclerosis (severity)
Initial sample794 European ancestry cases, 883 European ancestry controls
Replication sampleNA
Region6p23
Chromosome idchr6
Chromosome position15088920
Reported geneJARID2
Mapped geneLOC105374945 - LOC105374946
Upstream gene id105374945
Downstream gene id105374946
SNP gene ids
Upstream gene distance79892
Downstream gene distance54865
SNP risk allelers6941421-?
SNPsrs6941421
Merged0
SNP id current6941421
Contextintron_variant
Intergenic1
Allele frequency0.24
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta
%95 Ci[NR]
PlatformIllumina [551642]
CNVN
Mapped traitmultiple sclerosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003885
Study accessionGCST000266