Human SNP ID | rs6941421 |
---|---|
Human chromosome | chr6 |
Human SNP position | 15088920 |
Pig chromosome | chr7 |
Pig SNP position | 11823327 |
PubMed ID | 19010793 |
---|---|
Journal | Hum Mol Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/19010793 |
Study | Genome-wide association analysis of susceptibility and clinical phenotype in multiple sclerosis. |
Disease/Trait | Multiple sclerosis (severity) |
Initial sample | 794 European ancestry cases, 883 European ancestry controls |
Replication sample | NA |
Region | 6p23 |
Chromosome id | chr6 |
Chromosome position | 15088920 |
Reported gene | JARID2 |
Mapped gene | LOC105374945 - LOC105374946 |
Upstream gene id | 105374945 |
Downstream gene id | 105374946 |
SNP gene ids | |
Upstream gene distance | 79892 |
Downstream gene distance | 54865 |
SNP risk allele | rs6941421-? |
SNPs | rs6941421 |
Merged | 0 |
SNP id current | 6941421 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.24 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | |
Or beta | |
%95 Ci | [NR] |
Platform | Illumina [551642] |
CNV | N |
Mapped trait | multiple sclerosis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003885 |
Study accession | GCST000266 |