SNP Detail For rs6934608
1.Mapping Information
Human SNP ID rs6934608
Human chromosome chr6
Human SNP position 6169657
Pig chromosome chr7
Pig SNP position 3972849
2.Annotation Information
PubMed ID24324551
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/24324551
StudyGenome wide association study (GWAS) of Chagas cardiomyopathy in Trypanosoma cruzi seropositive subjects.
Disease/TraitAntibody status in Tripanosoma cruzi seropositivity
Initial sample580 Brazilian ancestry individuals
Replication sampleNA
Region6p25.1
Chromosome idchr6
Chromosome position6169657
Reported geneNR
Mapped geneF13A1
Upstream gene id
Downstream gene id
SNP gene ids2162
Upstream gene distance
Downstream gene distance
SNP risk allelers6934608-?
SNPsrs6934608
Merged0
SNP id current6934608
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000001
Pvalue mlog6
P value text
Or beta
%95 Ci
PlatformAffymetrix [5486770] (imputed)
CNVN
Mapped traitantibody measurement, Trypanosoma cruzi seropositivity
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004556, http://www.ebi.ac.uk/efo/EFO_0005530
Study accessionGCST002280