SNP Detail For rs6929137
1.Mapping Information
Human SNP ID rs6929137
Human chromosome chr6
Human SNP position 151615542
Pig chromosome chr1
Pig SNP position 17075668
2.Annotation Information
PubMed ID19079262
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19079262
StudyNew sequence variants associated with bone mineral density.
Disease/TraitBone mineral density (spine)
Initial sample6,865 European ancestry individuals
Replication sample8,510 European ancestry individuals
Region6q25.1
Chromosome idchr6
Chromosome position151615542
Reported geneESR1, C6orf97
Mapped geneCCDC170
Upstream gene id
Downstream gene id
SNP gene ids80129
Upstream gene distance
Downstream gene distance
SNP risk allelers6929137-A
SNPsrs6929137
Merged0
SNP id current6929137
Contextmissense_variant
Intergenic0
Allele frequency0.3
P value0.0000000002
Pvalue mlog9.69897000433601
P value text
Or beta0.1
%95 Ci[0.07-0.13] s.d. decrease
PlatformIllumina [305051]
CNVN
Mapped traitbone density
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003923
Study accessionGCST000295