SNP Detail For rs6927188
1.Mapping Information
Human SNP ID rs6927188
Human chromosome chr6
Human SNP position 42944851
Pig chromosome chr7
Pig SNP position 43477079
2.Annotation Information
PubMed ID26305897
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26305897
StudyGenome-Wide Association and Trans-ethnic Meta-Analysis for Advanced Diabetic Kidney Disease: Family Investigation of Nephropathy and Diabetes (FIND).
Disease/TraitDiabetic kidney disease
Initial sampleup to 1,564 African American cases, 369 African American diabetic controls, 1,288 African American non-diabetic controls, 538 American Indian ancestry cases, 319 American Indian ancestry diabetic controls, 342 European ancestry cases, 404 European ancest
Replication sampleNA
Region6p21.1
Chromosome idchr6
Chromosome position42944851
Reported geneNR
Mapped geneGNMT
Upstream gene id
Downstream gene id
SNP gene ids27232
Upstream gene distance
Downstream gene distance
SNP risk allelers6927188-?
SNPsrs6927188
Merged
SNP id current6927188
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000006
Pvalue mlog5.22184874961635
P value text(additive)
Or beta1.3513513
%95 Ci[1.18-1.54]
PlatformAffymetrix [NR]
CNVN
Mapped traitdiabetic nephropathy
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000401
Study accessionGCST003099