SNP Detail For rs6919939
1.Mapping Information
Human SNP ID rs6919939
Human chromosome chr6
Human SNP position 164553981
Pig chromosome chr1
Pig SNP position 5298384
2.Annotation Information
PubMed ID26198764
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26198764
StudyGenome-wide association study of schizophrenia in Ashkenazi Jews.
Disease/TraitSchizophrenia
Initial sample592 Ashkenazi Jewish ancestry cases, 505 Ashkenazi Jewish ancestry controls, 36,989 cases, 113,075 controls
Replication sampleNA
Region6q27
Chromosome idchr6
Chromosome position164553981
Reported geneNR
Mapped geneLOC105378107 - LOC105378111
Upstream gene id105378107
Downstream gene id105378111
SNP gene ids
Upstream gene distance216176
Downstream gene distance238594
SNP risk allelers6919939-A
SNPsrs6919939
Merged
SNP id current6919939
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000007
Pvalue mlog5.15490195998574
P value text
Or beta1.05
%95 Ci[NR]
PlatformIllumina [7158791] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST003048