Human SNP ID | rs6919346 |
---|---|
Human chromosome | chr6 |
Human SNP position | 160539327 |
Pig chromosome | chr1 |
Pig SNP position | 8778995 |
PubMed ID | 19124843 |
---|---|
Journal | J Lipid Res |
Link | www.ncbi.nlm.nih.gov/pubmed/19124843 |
Study | Genome-wide association study of plasma lipoprotein(a) levels identifies multiple genes on chromosome 6q. |
Disease/Trait | Lp (a) levels |
Initial sample | 357 Hutterite individuals |
Replication sample | 1,054 European ancestry males |
Region | 6q25.3 |
Chromosome id | chr6 |
Chromosome position | 160539327 |
Reported gene | LPA |
Mapped gene | LPA |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 4018 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs6919346-? |
SNPs | rs6919346 |
Merged | 0 |
SNP id current | 6919346 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.16 |
P value | 0.00000000004 |
Pvalue mlog | 10.397940008672 |
P value text | |
Or beta | 0.66 |
%95 Ci | [NR] mg/dl decrease |
Platform | Affymetrix [290327] |
CNV | N |
Mapped trait | apolipoprotein A 1 measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004614 |
Study accession | GCST000312 |