SNP Detail For rs6919346
1.Mapping Information
Human SNP ID rs6919346
Human chromosome chr6
Human SNP position 160539327
Pig chromosome chr1
Pig SNP position 8778995
2.Annotation Information
PubMed ID19124843
JournalJ Lipid Res
Linkwww.ncbi.nlm.nih.gov/pubmed/19124843
StudyGenome-wide association study of plasma lipoprotein(a) levels identifies multiple genes on chromosome 6q.
Disease/TraitLp (a) levels
Initial sample357 Hutterite individuals
Replication sample1,054 European ancestry males
Region6q25.3
Chromosome idchr6
Chromosome position160539327
Reported geneLPA
Mapped geneLPA
Upstream gene id
Downstream gene id
SNP gene ids4018
Upstream gene distance
Downstream gene distance
SNP risk allelers6919346-?
SNPsrs6919346
Merged0
SNP id current6919346
Contextintron_variant
Intergenic0
Allele frequency0.16
P value0.00000000004
Pvalue mlog10.397940008672
P value text
Or beta0.66
%95 Ci[NR] mg/dl decrease
PlatformAffymetrix [290327]
CNVN
Mapped traitapolipoprotein A 1 measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004614
Study accessionGCST000312