SNP Detail For rs6915443
1.Mapping Information
Human SNP ID rs6915443
Human chromosome chr6
Human SNP position 168356431
Pig chromosome chr1
Pig SNP position 2424533
2.Annotation Information
PubMed ID23754948
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23754948
StudySex-stratified genome-wide association studies including 270,000 individuals show sexual dimorphism in genetic loci for anthropometric traits.
Disease/TraitSexual dimorphism in anthropometric traits
Initial sampleup to 60,586 European ancestry males, up to 73,137 European ancestry females
Replication sampleup to 62,395 European ancestry males, up to 74,657 European ancestry females
Region6q27
Chromosome idchr6
Chromosome position168356431
Reported geneDACT2
Mapped geneLOC105378139 - LOC105378140
Upstream gene id105378139
Downstream gene id105378140
SNP gene ids
Upstream gene distance21908
Downstream gene distance54021
SNP risk allelers6915443-T
SNPsrs6915443
Merged0
SNP id current6915443
Contextregulatory_region_variant
Intergenic1
Allele frequency
P value0.000003
Pvalue mlog5.52287874528033
P value text(WC, men)
Or beta
%95 Ci
PlatformAffymetrix, Illumina [2846694] (imputed)
CNVN
Mapped traitwaist circumference, sexual dimorphism, anthropometry
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004342, http://www.ebi.ac.uk/efo/EFO_0005951, http://www.ebi.ac.uk/efo/EFO_0004302
Study accessionGCST002063