SNP Detail For rs6914831
1.Mapping Information
Human SNP ID rs6914831
Human chromosome chr6
Human SNP position 135318506
Pig chromosome chr1
Pig SNP position 32209984
2.Annotation Information
PubMed ID26502338
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26502338
StudyGenetic association analyses implicate aberrant regulation of innate and adaptive immunity genes in the pathogenesis of systemic lupus erythematosus.
Disease/TraitSystemic lupus erythematosus
Initial sample5,201 European ancestry cases, 9,066 European ancestry controls
Replication sample2,018 European ancestry cases, 6,925 European ancestry controls
Region6q23.3
Chromosome idchr6
Chromosome position135318506
Reported geneAHI1
Mapped geneAHI1
Upstream gene id
Downstream gene id
SNP gene ids54806
Upstream gene distance
Downstream gene distance
SNP risk allelers6914831-C
SNPsrs6914831
Merged
SNP id current6914831
Context3_prime_UTR_variant
Intergenic0
Allele frequency
P value0.0000004
Pvalue mlog6.39794000867203
P value text
Or beta1.11
%95 Ci[1.07鈥?.16]
PlatformIllumina [644674]
CNVN
Mapped traitsystemic lupus erythematosus
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0002690
Study accessionGCST003155