SNP Detail For rs6911520
1.Mapping Information
Human SNP ID rs6911520
Human chromosome chr6
Human SNP position 43855987
Pig chromosome chr7
Pig SNP position 44606979
2.Annotation Information
PubMed ID26718567
JournalNeurology
Linkwww.ncbi.nlm.nih.gov/pubmed/26718567
StudyShared genetic susceptibility of vascular-related biomarkers with ischemic and recurrent stroke.
Disease/TraitCreatinine levels in ischemic stroke
Initial sample1,725 European ancestry cases, 258 African ancestry cases, 117 cases
Replication sampleNA
Region6p21.1
Chromosome idchr6
Chromosome position43855987
Reported geneNR
Mapped geneLOC285857 - LOC105375068
Upstream gene id285857
Downstream gene id105375068
SNP gene ids
Upstream gene distance3646
Downstream gene distance6680
SNP risk allelers6911520-?
SNPsrs6911520
Merged
SNP id current6911520
Contextupstream_gene_variant
Intergenic1
Allele frequencyNR
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta
%95 Ci
PlatformIllumina [7500450] (imputed)
CNVN
Mapped traitIschemic stroke, serum creatinine measurement
Mapped trait URIhttp://purl.obolibrary.org/obo/HP_0002140, http://www.ebi.ac.uk/efo/EFO_0004518
Study accessionGCST003213