Human SNP ID | rs690705 |
---|---|
Human chromosome | chr13 |
Human SNP position | 34080781 |
Pig chromosome | chr11 |
Pig SNP position | 10304816 |
PubMed ID | 20061627 |
---|---|
Journal | J Alzheimers Dis |
Link | www.ncbi.nlm.nih.gov/pubmed/20061627 |
Study | Genome-wide scan of copy number variation in late-onset Alzheimer__s disease. |
Disease/Trait | Alzheimer__s disease |
Initial sample | 331 European ancestry cases, 368 European ancestry controls |
Replication sample | NA |
Region | 13q13.2 |
Chromosome id | chr13 |
Chromosome position | 34080781 |
Reported gene | RFC3 |
Mapped gene | LOC105370156 - LOC105370158 |
Upstream gene id | 105370156 |
Downstream gene id | 105370158 |
SNP gene ids | |
Upstream gene distance | 80124 |
Downstream gene distance | 267162 |
SNP risk allele | rs690705-? |
SNPs | rs690705 |
Merged | 0 |
SNP id current | 690705 |
Context | downstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.25 |
P value | 0.0000006 |
Pvalue mlog | 6.22184874961635 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Illumina [~ 550000] |
CNV | N |
Mapped trait | Alzheimers disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000249 |
Study accession | GCST000484 |