SNP Detail For rs6904416
1.Mapping Information
Human SNP ID rs6904416
Human chromosome chr6
Human SNP position 98542613
Pig chromosome chr1
Pig SNP position 74122809
2.Annotation Information
PubMed ID22788528
JournalInt J Immunogenet
Linkwww.ncbi.nlm.nih.gov/pubmed/22788528
StudyGenetic associations with C-reactive protein level and white blood cell count in the KARE study.
Disease/TraitC-reactive protein and white blood cell count
Initial sample8,722 individuals
Replication sampleNA
Region6q16.1
Chromosome idchr6
Chromosome position98542613
Reported geneintergenic
Mapped geneLOC105377910 - POU3F2
Upstream gene id105377910
Downstream gene id5454
SNP gene ids
Upstream gene distance22771
Downstream gene distance292091
SNP risk allelers6904416-C
SNPsrs6904416
Merged0
SNP id current6904416
Contextintergenic_variant
Intergenic1
Allele frequency0.019
P value0.0000000009
Pvalue mlog9.04575749056067
P value text(CRP)
Or beta0.183
%95 Ci[NR] mg/dl increase
PlatformAffymetrix [1701735] (imputed)
CNVN
Mapped traitC-reactive protein measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004458
Study accessionGCST001605