SNP Detail For rs6904029
1.Mapping Information
Human SNP ID rs6904029
Human chromosome chr6
Human SNP position 29975290
Pig chromosome chr7
Pig SNP position 27233320
2.Annotation Information
PubMed ID24939585
JournalEur J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24939585
StudyGenome-wide association analysis demonstrates the highly polygenic character of age-related hearing impairment.
Disease/TraitAge-related hearing impairment
Initial sample1,489 European ancestry individuals
Replication sampleNA
Region6p22.1
Chromosome idchr6
Chromosome position29975290
Reported geneHLA-A29.1, HCG9
Mapped geneHCG9
Upstream gene id
Downstream gene id
SNP gene ids10255
Upstream gene distance
Downstream gene distance
SNP risk allelers6904029-?
SNPsrs6904029
Merged0
SNP id current6904029
Contextnon_coding_transcript_exon_variant
Intergenic0
Allele frequency
P value0.000003
Pvalue mlog5.52287874528033
P value text(PC3)
Or beta0.0464
%95 Ci[NR] unit decrease
PlatformIllumina [4167292] (imputed)
CNVN
Mapped traitage-related hearing impairment
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005782
Study accessionGCST002491