SNP Detail For rs6901004
1.Mapping Information
Human SNP ID rs6901004
Human chromosome chr6
Human SNP position 111233619
Pig chromosome chr1
Pig SNP position 86703445
2.Annotation Information
PubMed ID24816252
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24816252
StudyAn atlas of genetic influences on human blood metabolites.
Disease/TraitBlood metabolite levels
Initial sample7,824 European ancestry individuals
Replication sampleNA
Region6q21
Chromosome idchr6
Chromosome position111233619
Reported geneSLC16A10
Mapped geneSLC16A10 - KIAA1919
Upstream gene id117247
Downstream gene id91749
SNP gene ids
Upstream gene distance10214
Downstream gene distance25660
SNP risk allelers6901004-C
SNPsrs6901004
Merged0
SNP id current6901004
Contextintron_variant
Intergenic1
Allele frequency0.57
P value0.00000000001
Pvalue mlog11
P value text(tryptophan)
Or beta0.006
%95 Ci[0.004-0.008] unit decrease
PlatformAffymetrix, Illumina [2100000] (imputed)
CNVN
Mapped traitblood metabolite measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005664
Study accessionGCST002443