SNP Detail For rs6894216
1.Mapping Information
Human SNP ID rs6894216
Human chromosome chr5
Human SNP position 130456441
Pig chromosome chr2
Pig SNP position 138139527
2.Annotation Information
PubMed ID22952603
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/22952603
StudyGenome-wide association study of d-amphetamine response in healthy volunteers identifies putative associations, including cadherin 13 (CDH13).
Disease/TraitResponse to amphetamines
Initial sample1 American Indian ancestry individual, 18 African American individuals, 10 Asian ancestry individuals, 325 European ancestry individuals, 17 Hispanic individuals, 10 individuals
Replication sampleNA
Region5q23.3
Chromosome idchr5
Chromosome position130456441
Reported geneintergenic
Mapped geneRNU7-53P - RPL11P2
Upstream gene id100151649
Downstream gene id133629
SNP gene ids
Upstream gene distance69762
Downstream gene distance533438
SNP risk allelers6894216-?
SNPsrs6894216
Merged0
SNP id current6894216
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000004
Pvalue mlog5.39794000867203
P value text(SF2)
Or beta
%95 Ci
PlatformAffymetrix [5476100] (imputed)
CNVN
Mapped traitresponse to drug
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0042493
Study accessionGCST001651