SNP Detail For rs6893807
1.Mapping Information
Human SNP ID rs6893807
Human chromosome chr5
Human SNP position 88669203
Pig chromosome chr2
Pig SNP position 98746934
2.Annotation Information
PubMed ID24861553
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24861553
StudyMeta-analysis of genome-wide association studies in East Asian-ancestry populations identifies four new loci for body mass index.
Disease/TraitBody mass index
Initial sample82,438 East Asian ancestry individuals, 4,301 South East Asian ancestry individuals
Replication sampleUp to 47,352 East Asian ancestry individuals
Region5q14.3
Chromosome idchr5
Chromosome position88669203
Reported geneLINC00461
Mapped geneLINC00461
Upstream gene id
Downstream gene id
SNP gene ids645323
Upstream gene distance
Downstream gene distance
SNP risk allelers6893807-G
SNPsrs6893807
Merged0
SNP id current6893807
Contextintron_variant
Intergenic0
Allele frequency0.46
P value0.000001
Pvalue mlog6
P value text
Or beta0.024
%95 Ci[0.014-0.034] unit increase
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitbody mass index
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004340
Study accessionGCST002461