Human SNP ID | rs6887276 |
---|---|
Human chromosome | chr5 |
Human SNP position | 128042602 |
Pig chromosome | chr2 |
Pig SNP position | 136322307 |
PubMed ID | 25282103 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25282103 |
Study | Defining the role of common variation in the genomic and biological architecture of adult human height. |
Disease/Trait | Height |
Initial sample | 253,288 European ancestry individuals |
Replication sample | 80,067 European ancestry individuals |
Region | 5q23.3 |
Chromosome id | chr5 |
Chromosome position | 128042602 |
Reported gene | SLC12A2 |
Mapped gene | LINC01184 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 644873 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs6887276-C |
SNPs | rs6887276 |
Merged | 0 |
SNP id current | 6887276 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.546 |
P value | 0.000000001 |
Pvalue mlog | 9 |
P value text | |
Or beta | 0.018 |
%95 Ci | [0.012-0.024] unit decrease |
Platform | Affymetrix, Illumina, Perlegen [2550858] (imputed) |
CNV | N |
Mapped trait | body height |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004339 |
Study accession | GCST002647 |