SNP Detail For rs6887276
1.Mapping Information
Human SNP ID rs6887276
Human chromosome chr5
Human SNP position 128042602
Pig chromosome chr2
Pig SNP position 136322307
2.Annotation Information
PubMed ID25282103
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25282103
StudyDefining the role of common variation in the genomic and biological architecture of adult human height.
Disease/TraitHeight
Initial sample253,288 European ancestry individuals
Replication sample80,067 European ancestry individuals
Region5q23.3
Chromosome idchr5
Chromosome position128042602
Reported geneSLC12A2
Mapped geneLINC01184
Upstream gene id
Downstream gene id
SNP gene ids644873
Upstream gene distance
Downstream gene distance
SNP risk allelers6887276-C
SNPsrs6887276
Merged0
SNP id current6887276
Contextintron_variant
Intergenic0
Allele frequency0.546
P value0.000000001
Pvalue mlog9
P value text
Or beta0.018
%95 Ci[0.012-0.024] unit decrease
PlatformAffymetrix, Illumina, Perlegen [2550858] (imputed)
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST002647