SNP Detail For rs6877440
1.Mapping Information
Human SNP ID rs6877440
Human chromosome chr5
Human SNP position 109708366
Pig chromosome chr2
Pig SNP position 119160580
2.Annotation Information
PubMed ID26242244
JournalSci Rep
Linkwww.ncbi.nlm.nih.gov/pubmed/26242244
StudyAssociation of chromosome 5q21.3 polymorphisms with the exploratory eye movement dysfunction in schizophrenia.
Disease/TraitExploratory eye movement dysfunction in schizophrenia (cognitive search score)
Initial sample128 Han Chinese ancestry cases
Replication sampleNA
Region5q21.3
Chromosome idchr5
Chromosome position109708366
Reported geneMAN2A1
Mapped geneMAN2A1
Upstream gene id
Downstream gene id
SNP gene ids4124
Upstream gene distance
Downstream gene distance
SNP risk allelers6877440-?
SNPsrs6877440
Merged
SNP id current6877440
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.00000007
Pvalue mlog7.15490195998574
P value text
Or beta3.63
%95 Ci[2.39-4.87] unit decrease
PlatformIllumina [498648]
CNVN
Mapped traitexploratory eye movement measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0007700
Study accessionGCST003064