SNP Detail For rs6871536
1.Mapping Information
Human SNP ID rs6871536
Human chromosome chr5
Human SNP position 132634182
Pig chromosome chr2
Pig SNP position 140396749
2.Annotation Information
PubMed ID24241537
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24241537
StudyA genome-wide association study identifies CDHR3 as a susceptibility locus for early childhood asthma with severe exacerbations.
Disease/TraitAsthma (childhood onset)
Initial sample1,173 European ancestry cases, 2,511 European ancestry controls
Replication sample395 European ancestry cases, 2,663 European ancestry controls, 63 Turkish, Surinamese, Dutch Antillean, Moroccan, Cape Verdian and other ancestry cases, 917 Turkish, Surinamese, Dutch Antillean, Moroccan, Cape Verdian and other ancestry controls, 6,783 ca
Region5q31.1
Chromosome idchr5
Chromosome position132634182
Reported geneRAD50
Mapped geneRAD50
Upstream gene id
Downstream gene id
SNP gene ids10111
Upstream gene distance
Downstream gene distance
SNP risk allelers6871536-C
SNPsrs6871536
Merged0
SNP id current6871536
Contextintron_variant
Intergenic0
Allele frequency0.22
P value0.0000008
Pvalue mlog6.09691001300805
P value text
Or beta1.17
%95 Ci[1.10-1.25]
PlatformAffymetrix, Illumina [124514]
CNVN
Mapped traitchildhood onset asthma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004591
Study accessionGCST002275