Human SNP ID | rs6871536 |
---|---|
Human chromosome | chr5 |
Human SNP position | 132634182 |
Pig chromosome | chr2 |
Pig SNP position | 140396749 |
PubMed ID | 24241537 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24241537 |
Study | A genome-wide association study identifies CDHR3 as a susceptibility locus for early childhood asthma with severe exacerbations. |
Disease/Trait | Asthma (childhood onset) |
Initial sample | 1,173 European ancestry cases, 2,511 European ancestry controls |
Replication sample | 395 European ancestry cases, 2,663 European ancestry controls, 63 Turkish, Surinamese, Dutch Antillean, Moroccan, Cape Verdian and other ancestry cases, 917 Turkish, Surinamese, Dutch Antillean, Moroccan, Cape Verdian and other ancestry controls, 6,783 ca |
Region | 5q31.1 |
Chromosome id | chr5 |
Chromosome position | 132634182 |
Reported gene | RAD50 |
Mapped gene | RAD50 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 10111 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs6871536-C |
SNPs | rs6871536 |
Merged | 0 |
SNP id current | 6871536 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.22 |
P value | 0.0000008 |
Pvalue mlog | 6.09691001300805 |
P value text | |
Or beta | 1.17 |
%95 Ci | [1.10-1.25] |
Platform | Affymetrix, Illumina [124514] |
CNV | N |
Mapped trait | childhood onset asthma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004591 |
Study accession | GCST002275 |