SNP Detail For rs6868545
1.Mapping Information
Human SNP ID rs6868545
Human chromosome chr5
Human SNP position 153115323
Pig chromosome chr16
Pig SNP position 75864727
2.Annotation Information
PubMed ID26198764
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26198764
StudyGenome-wide association study of schizophrenia in Ashkenazi Jews.
Disease/TraitSchizophrenia
Initial sample592 Ashkenazi Jewish ancestry cases, 505 Ashkenazi Jewish ancestry controls, 36,989 cases, 113,075 controls
Replication sampleNA
Region5q33.1
Chromosome idchr5
Chromosome position153115323
Reported geneNR
Mapped geneLINC01470 - GRIA1
Upstream gene id101927134
Downstream gene id2890
SNP gene ids
Upstream gene distance142974
Downstream gene distance374373
SNP risk allelers6868545-C
SNPsrs6868545
Merged
SNP id current6868545
Contextintron_variant
Intergenic1
Allele frequencyNR
P value0.0000007
Pvalue mlog6.15490195998574
P value text
Or beta1.1235955
%95 Ci[NR]
PlatformIllumina [7158791] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST003048