SNP Detail For rs6861681
1.Mapping Information
Human SNP ID rs6861681
Human chromosome chr5
Human SNP position 173935455
Pig chromosome chr16
Pig SNP position 54834649
2.Annotation Information
PubMed ID20935629
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20935629
StudyMeta-analysis identifies 13 new loci associated with waist-hip ratio and reveals sexual dimorphism in the genetic basis of fat distribution.
Disease/TraitWaist-hip ratio
Initial sampleUp to 77,167 European ancestry individuals
Replication sampleUp to 113,636 European ancestry individuals
Region5q35.2
Chromosome idchr5
Chromosome position173935455
Reported geneCPEB4
Mapped geneCPEB4
Upstream gene id
Downstream gene id
SNP gene ids80315
Upstream gene distance
Downstream gene distance
SNP risk allelers6861681-A
SNPsrs6861681
Merged0
SNP id current6861681
Contextintron_variant
Intergenic0
Allele frequency0.34
P value0.000000002
Pvalue mlog8.69897000433601
P value text
Or beta0.02
%95 Ci[NR] unit increase
PlatformAffymetrix, Illumina, Perlegen [up to 2850269] (imputed)
CNVN
Mapped traitwaist-hip ratio
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004343
Study accessionGCST000829