SNP Detail For rs6855629
1.Mapping Information
Human SNP ID rs6855629
Human chromosome chr4
Human SNP position 105213159
Pig chromosome chr8
Pig SNP position 125073081
2.Annotation Information
PubMed ID23563607
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23563607
StudyGenome-wide meta-analysis identifies 11 new loci for anthropometric traits and provides insights into genetic architecture.
Disease/TraitHeight
Initial sample8,097 European ancestry tall individuals, 8,099 European ancestry short individuals
Replication sample4,872 European ancestry tall individuals, 4,831 European ancestry short individuals
Region4q24
Chromosome idchr4
Chromosome position105213159
Reported geneKIAA1546
Mapped geneTET2-AS1, TET2
Upstream gene id
Downstream gene id
SNP gene ids104384744, 54790
Upstream gene distance
Downstream gene distance
SNP risk allelers6855629-G
SNPsrs6855629
Merged0
SNP id current6855629
Contextintron_variant
Intergenic0
Allele frequency0.63
P value0.00000002
Pvalue mlog7.69897000433601
P value text
Or beta1.14
%95 Ci[NR]
PlatformAffymetrix, Illumina [~ 2800000] (imputed)
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST001956