SNP Detail For rs6851442
1.Mapping Information
Human SNP ID rs6851442
Human chromosome chr4
Human SNP position 108038126
Pig chromosome chr8
Pig SNP position 122210579
2.Annotation Information
PubMed ID24529757
JournalNeurobiol Aging
Linkwww.ncbi.nlm.nih.gov/pubmed/24529757
StudyGenome-wide association study combining pathway analysis for typical sporadic amyotrophic lateral sclerosis in Chinese Han populations.
Disease/TraitAmyotrophic lateral sclerosis (sporadic)
Initial sample250 Han Chinese ancestry cases, 250 Han Chinese ancestry controls
Replication sampleNA
Region4q25
Chromosome idchr4
Chromosome position108038126
Reported geneHADH
Mapped geneHADH - LEF1
Upstream gene id3033
Downstream gene id51176
SNP gene ids
Upstream gene distance2951
Downstream gene distance9419
SNP risk allelers6851442-?
SNPsrs6851442
Merged0
SNP id current6851442
Contextdownstream_gene_variant
Intergenic1
Allele frequency
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta
%95 Ci
PlatformIllumina [859311]
CNVN
Mapped traitsporadic amyotrophic lateral sclerosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001357
Study accessionGCST002337