Human SNP ID | rs6835704 |
---|---|
Human chromosome | chr4 |
Human SNP position | 121222509 |
Pig chromosome | chr8 |
Pig SNP position | 110279158 |
PubMed ID | 23468962 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23468962 |
Study | A genome-wide scan for breast cancer risk haplotypes among African American women. |
Disease/Trait | Breast cancer |
Initial sample | 3,016 African American cases, 2,745 African American controls |
Replication sample | NA |
Region | 4q27 |
Chromosome id | chr4;4 |
Chromosome position | 121222509;121200339 |
Reported gene | |
Mapped gene | TNIP3; TNIP3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs6835704-?; rs17435444-? |
SNPs | rs6835704; rs17435444 |
Merged | 0 |
SNP id current | |
Context | intron_variant; intron_variant |
Intergenic | |
Allele frequency | NR |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Illumina [1006480] |
CNV | N |
Mapped trait | breast carcinoma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000305 |
Study accession | GCST001879 |