SNP Detail For rs6832720
1.Mapping Information
Human SNP ID rs6832720
Human chromosome chr4
Human SNP position 57282220
Pig chromosome chr8
Pig SNP position 59411284
2.Annotation Information
PubMed ID25293881
JournalCancer Epidemiol Biomarkers Prev
Linkwww.ncbi.nlm.nih.gov/pubmed/25293881
StudyThe Contribution of Common Genetic Variation to Nicotine and Cotinine Glucuronidation in Multiple Ethnic/Racial Populations.
Disease/TraitCotinine glucuronidation
Initial sample437 European ancestry current smoker individuals, 364 African American current smoker individuals, 453 Latino current smoker individuals, 674 Japanese ancestry current smoker individuals, 311 Native Hawaiian ancestry current smoker individuals
Replication sampleNA
Region4q12
Chromosome idchr4
Chromosome position57282220
Reported geneOC255130
Mapped geneIGFBP7-AS1 - LOC101928851
Upstream gene id255130
Downstream gene id101928851
SNP gene ids
Upstream gene distance76921
Downstream gene distance143652
SNP risk allelers6832720-A
SNPsrs6832720
Merged0
SNP id current6832720
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000000007
Pvalue mlog8.15490195998574
P value text
Or beta0.0585
%95 Ci[NR] unit decrease
PlatformIllumina [11892802] (imputed)
CNVN
Mapped traitcotinine glucuronidation measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006508
Study accessionGCST002652