Human SNP ID | rs6832720 |
---|---|
Human chromosome | chr4 |
Human SNP position | 57282220 |
Pig chromosome | chr8 |
Pig SNP position | 59411284 |
PubMed ID | 25293881 |
---|---|
Journal | Cancer Epidemiol Biomarkers Prev |
Link | www.ncbi.nlm.nih.gov/pubmed/25293881 |
Study | The Contribution of Common Genetic Variation to Nicotine and Cotinine Glucuronidation in Multiple Ethnic/Racial Populations. |
Disease/Trait | Cotinine glucuronidation |
Initial sample | 437 European ancestry current smoker individuals, 364 African American current smoker individuals, 453 Latino current smoker individuals, 674 Japanese ancestry current smoker individuals, 311 Native Hawaiian ancestry current smoker individuals |
Replication sample | NA |
Region | 4q12 |
Chromosome id | chr4 |
Chromosome position | 57282220 |
Reported gene | OC255130 |
Mapped gene | IGFBP7-AS1 - LOC101928851 |
Upstream gene id | 255130 |
Downstream gene id | 101928851 |
SNP gene ids | |
Upstream gene distance | 76921 |
Downstream gene distance | 143652 |
SNP risk allele | rs6832720-A |
SNPs | rs6832720 |
Merged | 0 |
SNP id current | 6832720 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000000007 |
Pvalue mlog | 8.15490195998574 |
P value text | |
Or beta | 0.0585 |
%95 Ci | [NR] unit decrease |
Platform | Illumina [11892802] (imputed) |
CNV | N |
Mapped trait | cotinine glucuronidation measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006508 |
Study accession | GCST002652 |