SNP Detail For rs6828577
1.Mapping Information
Human SNP ID rs6828577
Human chromosome chr4
Human SNP position 118783346
Pig chromosome chr8
Pig SNP position 112659018
2.Annotation Information
PubMed ID25948407
JournalBMJ Open
Linkwww.ncbi.nlm.nih.gov/pubmed/25948407
StudyGenome-wide association study of perioperative myocardial infarction after coronary artery bypass surgery.
Disease/TraitPerioperative myocardial infarction in coronary artery bypass surgery
Initial sample112 cases, 1,321 controls
Replication sample113 European ancestry cases, 509 European ancestry controls
Region4q26
Chromosome idchr4;4
Chromosome position118789266;118783346
Reported geneSEC24D
Mapped geneSEC24D; SEC24D
Upstream gene id
Downstream gene id
SNP gene ids
Upstream gene distance
Downstream gene distance
SNP risk allelers6822035-A; rs6828577-A
SNPsrs6822035; rs6828577
Merged
SNP id current
Contextintron_variant; intron_variant
Intergenic
Allele frequency0.287
P value0.000009
Pvalue mlog5.04575749056067
P value text
Or beta1.65
%95 Ci[1.33-2.06]
PlatformIllumina [534390]
CNVN
Mapped traitcoronary artery bypass, myocardial infarction
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003776, http://www.ebi.ac.uk/efo/EFO_0000612
Study accessionGCST002892