SNP Detail For rs6819266
1.Mapping Information
Human SNP ID rs6819266
Human chromosome chr4
Human SNP position 62476552
Pig chromosome chr8
Pig SNP position 65036019
2.Annotation Information
PubMed ID23326517
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23326517
StudyInsights into the genetic architecture of early stage age-related macular degeneration: a genome-wide association study meta-analysis.
Disease/TraitAge-related macular degeneration
Initial sample3,772 European ancestry cases, 16,033 European ancestry controls
Replication sample264 Asian ancestry cases, 3,926 Asian ancestry controls
Region4q13.1
Chromosome idchr4
Chromosome position62476552
Reported geneintergenic
Mapped geneLOC105377251 - HMGN1P11
Upstream gene id105377251
Downstream gene id644534
SNP gene ids
Upstream gene distance121447
Downstream gene distance33805
SNP risk allelers6819266-?
SNPsrs6819266
Merged0
SNP id current6819266
Contextintergenic_variant
Intergenic1
Allele frequency0.62
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta1.15
%95 Ci[1.09-1.22]
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitage-related macular degeneration
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001365
Study accessionGCST001814