Human SNP ID | rs6819266 |
---|---|
Human chromosome | chr4 |
Human SNP position | 62476552 |
Pig chromosome | chr8 |
Pig SNP position | 65036019 |
PubMed ID | 23326517 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23326517 |
Study | Insights into the genetic architecture of early stage age-related macular degeneration: a genome-wide association study meta-analysis. |
Disease/Trait | Age-related macular degeneration |
Initial sample | 3,772 European ancestry cases, 16,033 European ancestry controls |
Replication sample | 264 Asian ancestry cases, 3,926 Asian ancestry controls |
Region | 4q13.1 |
Chromosome id | chr4 |
Chromosome position | 62476552 |
Reported gene | intergenic |
Mapped gene | LOC105377251 - HMGN1P11 |
Upstream gene id | 105377251 |
Downstream gene id | 644534 |
SNP gene ids | |
Upstream gene distance | 121447 |
Downstream gene distance | 33805 |
SNP risk allele | rs6819266-? |
SNPs | rs6819266 |
Merged | 0 |
SNP id current | 6819266 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.62 |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | |
Or beta | 1.15 |
%95 Ci | [1.09-1.22] |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | age-related macular degeneration |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001365 |
Study accession | GCST001814 |