SNP Detail For rs681900
1.Mapping Information
Human SNP ID rs681900
Human chromosome chr2
Human SNP position 74847840
Pig chromosome chr3
Pig SNP position 71393056
2.Annotation Information
PubMed ID22087292
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/22087292
StudyBivariate genome-wide association analyses of femoral neck bone geometry and appendicular lean mass.
Disease/TraitFemoral neck bone geometry
Initial sample1,627 Han Chinese ancestry individuals
Replication sample2,286 European ancestry individuals
Region2p12
Chromosome idchr2
Chromosome position74847840
Reported geneHK2
Mapped geneHK2
Upstream gene id
Downstream gene id
SNP gene ids3099
Upstream gene distance
Downstream gene distance
SNP risk allelers681900-?
SNPsrs681900
Merged0
SNP id current681900
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000003
Pvalue mlog5.52287874528033
P value text(ALM-BR)
Or beta
%95 Ci
PlatformAffymetrix [689368]
CNVN
Mapped traitfemoral neck bone geometry
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004511
Study accessionGCST001315