Human SNP ID | rs681900 |
---|---|
Human chromosome | chr2 |
Human SNP position | 74847840 |
Pig chromosome | chr3 |
Pig SNP position | 71393056 |
PubMed ID | 22087292 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/22087292 |
Study | Bivariate genome-wide association analyses of femoral neck bone geometry and appendicular lean mass. |
Disease/Trait | Femoral neck bone geometry |
Initial sample | 1,627 Han Chinese ancestry individuals |
Replication sample | 2,286 European ancestry individuals |
Region | 2p12 |
Chromosome id | chr2 |
Chromosome position | 74847840 |
Reported gene | HK2 |
Mapped gene | HK2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 3099 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs681900-? |
SNPs | rs681900 |
Merged | 0 |
SNP id current | 681900 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | (ALM-BR) |
Or beta | |
%95 Ci | |
Platform | Affymetrix [689368] |
CNV | N |
Mapped trait | femoral neck bone geometry |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004511 |
Study accession | GCST001315 |