SNP Detail For rs6816344
1.Mapping Information
Human SNP ID rs6816344
Human chromosome chr4
Human SNP position 72917687
Pig chromosome chr8
Pig SNP position 73234776
2.Annotation Information
PubMed ID21546767
JournalAm J Nephrol
Linkwww.ncbi.nlm.nih.gov/pubmed/21546767
StudyGenome-wide association scan for survival on dialysis in African-Americans with type 2 diabetes.
Disease/TraitDialysis-related mortality
Initial sample610 African American type 2 diabetes cases
Replication sampleNA
Region4q13.3
Chromosome idchr4
Chromosome position72917687
Reported geneCOX18, ADAMTS3
Mapped geneHNRNPA1P67 - LOC105377273
Upstream gene id728019
Downstream gene id105377273
SNP gene ids
Upstream gene distance109303
Downstream gene distance36155
SNP risk allelers6816344-?
SNPsrs6816344
Merged0
SNP id current6816344
Contextintergenic_variant
Intergenic1
Allele frequency0.49
P value0.000001
Pvalue mlog6
P value text
Or beta1.7
%95 Ci[1.37-2.12]
PlatformAffymetrix [832357]
CNVN
Mapped traitchronic kidney disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003884
Study accessionGCST001066