SNP Detail For rs6813195
1.Mapping Information
Human SNP ID rs6813195
Human chromosome chr4
Human SNP position 152599323
Pig chromosome chr8
Pig SNP position 80856631
2.Annotation Information
PubMed ID24509480
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24509480
StudyGenome-wide trans-ancestry meta-analysis provides insight into the genetic architecture of type 2 diabetes susceptibility.
Disease/TraitType 2 diabetes
Initial sample12,171 European ancestry cases, 56,862 European ancestry controls, 6,952 East Asian ancestry cases, 11,865 East Asian ancestry controls, 5,561 South Asian ancestry cases, 14,458 South Asian ancestry controls, 1,804 Mexican ancestry cases, 779 Mexican ance
Replication sample21,491 European ancestry cases, 55,647 European ancestry controls
Region4q31.3
Chromosome idchr4
Chromosome position152599323
Reported geneTMEM154
Mapped geneLOC105377493 - RPS14P6
Upstream gene id105377493
Downstream gene id646737
SNP gene ids
Upstream gene distance45565
Downstream gene distance14501
SNP risk allelers6813195-C
SNPsrs6813195
Merged0
SNP id current6813195
Contextintergenic_variant
Intergenic1
Allele frequency
P value0.00000000000004
Pvalue mlog13.397940008672
P value text
Or beta1.08
%95 Ci[1.06-1.10]
PlatformAffymetrix, Illumina [2500000] (imputed)
CNVN
Mapped traittype II diabetes mellitus
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001360
Study accessionGCST002352