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SNP Detail For rs6808138
1.Mapping Information
| Human SNP ID | rs6808138 |
|---|---|
| Human chromosome | chr3 |
| Human SNP position | 161674788 |
| Pig chromosome | chr13 |
| Pig SNP position | 109896461 |
2.Annotation Information
| PubMed ID | 18821565 |
|---|---|
| Journal | Am J Med Genet B Neuropsychiatr Genet |
| Link | www.ncbi.nlm.nih.gov/pubmed/18821565 |
| Study | Genome-wide association scan of quantitative traits for attention deficit hyperactivity disorder identifies novel associations and confirms candidate gene associations. |
| Disease/Trait | Hyperactive-impulsive symptoms |
| Initial sample | 930 European ancestry trios |
| Replication sample | NA |
| Region | 3q26.1 |
| Chromosome id | chr3 |
| Chromosome position | 161674788 |
| Reported gene | intergenic |
| Mapped gene | OTOL1 - LINC01192 |
| Upstream gene id | 131149 |
| Downstream gene id | 647107 |
| SNP gene ids | |
| Upstream gene distance | 170813 |
| Downstream gene distance | 1502455 |
| SNP risk allele | rs6808138-? |
| SNPs | rs6808138 |
| Merged | 0 |
| SNP id current | 6808138 |
| Context | intergenic_variant |
| Intergenic | 1 |
| Allele frequency | NR |
| P value | 0.000005 |
| Pvalue mlog | 5.30102999566398 |
| P value text | (binary) |
| Or beta | |
| %95 Ci | |
| Platform | Perlegen [429981] |
| CNV | N |
| Mapped trait | behavior |
| Mapped trait URI | http://purl.obolibrary.org/obo/GO_0007610 |
| Study accession | GCST000278 |
| PubMed ID | 18821565 |
| Journal | Am J Med Genet B Neuropsychiatr Genet |
| Link | www.ncbi.nlm.nih.gov/pubmed/18821565 |
| Study | Genome-wide association scan of quantitative traits for attention deficit hyperactivity disorder identifies novel associations and confirms candidate gene associations. |
| Disease/Trait | Hyperactive-impulsive symptoms |
| Initial sample | 930 European ancestry trios |
| Replication sample | NA |
| Region | 3q26.1 |
| Chromosome id | chr3 |
| Chromosome position | 161674788 |
| Reported gene | intergenic |
| Mapped gene | OTOL1 - LINC01192 |
| Upstream gene id | 131149 |
| Downstream gene id | 647107 |
| SNP gene ids | |
| Upstream gene distance | 170813 |
| Downstream gene distance | 1502455 |
| SNP risk allele | rs6808138-? |
| SNPs | rs6808138 |
| Merged | 0 |
| SNP id current | 6808138 |
| Context | intergenic_variant |
| Intergenic | 1 |
| Allele frequency | NR |
| P value | 0.000008 |
| Pvalue mlog | 5.09691001300805 |
| P value text | (binary) |
| Or beta | |
| %95 Ci | |
| Platform | Perlegen [429981] |
| CNV | N |
| Mapped trait | behavior |
| Mapped trait URI | http://purl.obolibrary.org/obo/GO_0007610 |
| Study accession | GCST000278 |
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