SNP Detail For rs68043594
1.Mapping Information
Human SNP ID rs68043594
Human chromosome chr22
Human SNP position 27597456
Pig chromosome chr14
Pig SNP position 47751718
2.Annotation Information
PubMed ID26265036
JournalPharmacogenomics
Linkwww.ncbi.nlm.nih.gov/pubmed/26265036
StudyGenome-wide association study of warfarin maintenance dose in a Brazilian sample.
Disease/TraitWarfarin maintenance dose
Initial sample180 low dose Brazilian ancestry individuals, 187 high dose Brazilian ancestry individuals
Replication sample798 European ancestry individuals, 1611 Japanese ancestry individuals, 191 African American individuals
Region22q12.1
Chromosome idchr22
Chromosome position27597456
Reported geneNR
Mapped geneLOC105372981 - MN1
Upstream gene id105372981
Downstream gene id4330
SNP gene ids
Upstream gene distance35971
Downstream gene distance150821
SNP risk allelers68043594-T
SNPsrs68043594
Merged
SNP id current68043594
Contextintergenic_variant
Intergenic1
Allele frequency0.925
P value0.0000001
Pvalue mlog7
P value text(conditional on rs749671,CYP2C9*2 and CYP2C9*3, Brazilians)
Or beta55.555557
%95 Ci[NR]
PlatformAffymetrix [> 650000] (imputed)
CNVN
Mapped traitresponse to anticoagulant
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0061476
Study accessionGCST003085