SNP Detail For rs6800435
1.Mapping Information
Human SNP ID rs6800435
Human chromosome chr3
Human SNP position 10762866
Pig chromosome chr13
Pig SNP position 74110726
2.Annotation Information
PubMed ID26198764
JournalAm J Med Genet B Neuropsychiatr Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26198764
StudyGenome-wide association study of schizophrenia in Ashkenazi Jews.
Disease/TraitSchizophrenia
Initial sample592 Ashkenazi Jewish ancestry cases, 505 Ashkenazi Jewish ancestry controls, 36,989 cases, 113,075 controls
Replication sampleNA
Region3p25.3
Chromosome idchr3
Chromosome position10762866
Reported geneNR
Mapped geneLINC00606
Upstream gene id
Downstream gene id
SNP gene ids285370
Upstream gene distance
Downstream gene distance
SNP risk allelers6800435-A
SNPsrs6800435
Merged
SNP id current6800435
Contextnon_coding_transcript_exon_variant
Intergenic0
Allele frequencyNR
P value0.0000005
Pvalue mlog6.30102999566398
P value text
Or beta1.08
%95 Ci[NR]
PlatformIllumina [7158791] (imputed)
CNVN
Mapped traitschizophrenia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000692
Study accessionGCST003048