SNP Detail For rs6796026
1.Mapping Information
Human SNP ID rs6796026
Human chromosome chr3
Human SNP position 96609983
Pig chromosome chr13
Pig SNP position 173855800
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region3q11.2
Chromosome idchr3
Chromosome position96609983
Reported geneRPL18AP8
Mapped geneMIR8060 - RPL18AP8
Upstream gene id102465864
Downstream gene id644082
SNP gene ids
Upstream gene distance249944
Downstream gene distance9286
SNP risk allelers6796026-A
SNPsrs6796026
Merged0
SNP id current6796026
Contextupstream_gene_variant
Intergenic1
Allele frequency0.008
P value0.000008
Pvalue mlog5.09691001300805
P value text(IGF1 free )
Or beta0.03
%95 Ci[NR] ng/mL increase
PlatformIllumina [899892]
CNVN
Mapped traitIGF-1 measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004627
Study accessionGCST001762