Human SNP ID | rs6794092 |
---|---|
Human chromosome | chr3 |
Human SNP position | 171840554 |
Pig chromosome | chr13 |
Pig SNP position | 119397540 |
PubMed ID | 21701570 |
---|---|
Journal | Obesity (Silver Spring) |
Link | www.ncbi.nlm.nih.gov/pubmed/21701570 |
Study | Genome-wide association of BMI in African Americans. |
Disease/Trait | Body mass index |
Initial sample | 1,715 African American individuals |
Replication sample | 3,274 African American individuals |
Region | 3q26.31 |
Chromosome id | chr3 |
Chromosome position | 171840554 |
Reported gene | PP13439, TMEM212 |
Mapped gene | PLD1 - TMEM212 |
Upstream gene id | 5337 |
Downstream gene id | 389177 |
SNP gene ids | |
Upstream gene distance | 30060 |
Downstream gene distance | 2795 |
SNP risk allele | rs6794092-G |
SNPs | rs6794092 |
Merged | 0 |
SNP id current | 6794092 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.9 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 0.167 |
%95 Ci | [0.10-0.24] s.d. increase |
Platform | Affymetrix [746626] |
CNV | N |
Mapped trait | body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST001125 |