SNP Detail For rs6794092
1.Mapping Information
Human SNP ID rs6794092
Human chromosome chr3
Human SNP position 171840554
Pig chromosome chr13
Pig SNP position 119397540
2.Annotation Information
PubMed ID21701570
JournalObesity (Silver Spring)
Linkwww.ncbi.nlm.nih.gov/pubmed/21701570
StudyGenome-wide association of BMI in African Americans.
Disease/TraitBody mass index
Initial sample1,715 African American individuals
Replication sample3,274 African American individuals
Region3q26.31
Chromosome idchr3
Chromosome position171840554
Reported genePP13439, TMEM212
Mapped genePLD1 - TMEM212
Upstream gene id5337
Downstream gene id389177
SNP gene ids
Upstream gene distance30060
Downstream gene distance2795
SNP risk allelers6794092-G
SNPsrs6794092
Merged0
SNP id current6794092
Contextupstream_gene_variant
Intergenic1
Allele frequency0.9
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta0.167
%95 Ci[0.10-0.24] s.d. increase
PlatformAffymetrix [746626]
CNVN
Mapped traitbody mass index
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004340
Study accessionGCST001125