SNP Detail For rs678741
1.Mapping Information
Human SNP ID rs678741
Human chromosome chr10
Human SNP position 101237824
Pig chromosome chr14
Pig SNP position 122037691
2.Annotation Information
PubMed ID26394188
JournalNat Commun
Linkwww.ncbi.nlm.nih.gov/pubmed/26394188
StudyGenome-wide association study identifies new susceptibility loci for adolescent idiopathic scoliosis in Chinese girls.
Disease/TraitAdolescent idiopathic scoliosis
Initial sample960 Han Chinese ancestry cases, 1,499 Han Chinese ancestry controls
Replication sample3,316 Han Chinese ancestry cases, 4,516 Han Chinese ancestry controls
Region10q24.32
Chromosome idchr10
Chromosome position101237824
Reported geneLBX1AS1
Mapped geneLBX1-AS1
Upstream gene id
Downstream gene id
SNP gene ids399806
Upstream gene distance
Downstream gene distance
SNP risk allelers678741-A
SNPsrs678741
Merged
SNP id current678741
Contextintron_variant
Intergenic0
Allele frequency0.451
P value1E-36
Pvalue mlog36
P value text
Or beta1.44
%95 Ci[1.37鈥?.52]
PlatformAffymetrix [516220]
CNVN
Mapped traitadolescent idiopathic scoliosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005423
Study accessionGCST003128