Human SNP ID | rs678741 |
---|---|
Human chromosome | chr10 |
Human SNP position | 101237824 |
Pig chromosome | chr14 |
Pig SNP position | 122037691 |
PubMed ID | 26394188 |
---|---|
Journal | Nat Commun |
Link | www.ncbi.nlm.nih.gov/pubmed/26394188 |
Study | Genome-wide association study identifies new susceptibility loci for adolescent idiopathic scoliosis in Chinese girls. |
Disease/Trait | Adolescent idiopathic scoliosis |
Initial sample | 960 Han Chinese ancestry cases, 1,499 Han Chinese ancestry controls |
Replication sample | 3,316 Han Chinese ancestry cases, 4,516 Han Chinese ancestry controls |
Region | 10q24.32 |
Chromosome id | chr10 |
Chromosome position | 101237824 |
Reported gene | LBX1AS1 |
Mapped gene | LBX1-AS1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 399806 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs678741-A |
SNPs | rs678741 |
Merged | |
SNP id current | 678741 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.451 |
P value | 1E-36 |
Pvalue mlog | 36 |
P value text | |
Or beta | 1.44 |
%95 Ci | [1.37鈥?.52] |
Platform | Affymetrix [516220] |
CNV | N |
Mapped trait | adolescent idiopathic scoliosis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005423 |
Study accession | GCST003128 |