SNP Detail For rs6785504
1.Mapping Information
Human SNP ID rs6785504
Human chromosome chr3
Human SNP position 152954990
Pig chromosome chr13
Pig SNP position 101147502
2.Annotation Information
PubMed ID21659360
JournalHaematologica
Linkwww.ncbi.nlm.nih.gov/pubmed/21659360
StudyAssociation between single nucleotide polymorphism-genotype and outcome of patients with chronic lymphocytic leukemia in a randomized chemotherapy trial.
Disease/TraitResponse to antineoplastic agents
Initial sample356 European ancestry cases
Replication sample380 European ancestry cases
Region3q25.2
Chromosome idchr3
Chromosome position152954990
Reported geneintergenic
Mapped geneP2RY1 - HMGN2P13
Upstream gene id5028
Downstream gene id100289682
SNP gene ids
Upstream gene distance116934
Downstream gene distance112179
SNP risk allelers6785504-T
SNPsrs6785504
Merged0
SNP id current6785504
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000007
Pvalue mlog5.15490195998574
P value text
Or beta2.11
%95 Ci[1.51-2.94]
PlatformIllumina [326385]
CNVN
Mapped traitresponse to antineoplastic agent
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097327
Study accessionGCST001095