SNP Detail For rs6783485
1.Mapping Information
Human SNP ID rs6783485
Human chromosome chr3
Human SNP position 59442071
Pig chromosome chr13
Pig SNP position 45339204
2.Annotation Information
PubMed ID26227905
JournalMol Neurobiol
Linkwww.ncbi.nlm.nih.gov/pubmed/26227905
StudyA Pooling Genome-Wide Association Study Combining a Pathway Analysis for Typical Sporadic Parkinson__s Disease in the Han Population of Chinese Mainland.
Disease/TraitParkinson__s disease
Initial sample250 Han Chinese ancestry cases, 250 Han Chinese ancestry controls
Replication sampleNA
Region3p14.2
Chromosome idchr3
Chromosome position59442071
Reported geneC3orf67, LOC339902
Mapped geneLOC105377110
Upstream gene id
Downstream gene id
SNP gene ids105377110
Upstream gene distance
Downstream gene distance
SNP risk allelers6783485-?
SNPsrs6783485
Merged
SNP id current6783485
Contextintergenic_variant
Intergenic0
Allele frequencyNR
P value0.000001
Pvalue mlog6
P value text
Or beta5
%95 Ci[2.86-8.33]
PlatformIllumina [862198]
CNVN
Mapped traitParkinson__s disease
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0002508
Study accessionGCST003059