Human SNP ID | rs6782029 |
---|---|
Human chromosome | chr3 |
Human SNP position | 11634315 |
Pig chromosome | chr13 |
Pig SNP position | 74986527 |
PubMed ID | 21079607 |
---|---|
Journal | Mol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/21079607 |
Study | A genome-wide association study on common SNPs and rare CNVs in anorexia nervosa. |
Disease/Trait | Anorexia nervosa |
Initial sample | 1,033 European ancestry cases, 3,733 European ancestry controls |
Replication sample | NA |
Region | 3p25.2 |
Chromosome id | chr3 |
Chromosome position | 11634315 |
Reported gene | VGLL4 |
Mapped gene | VGLL4 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 9686 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs6782029-? |
SNPs | rs6782029 |
Merged | 0 |
SNP id current | 6782029 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.24 |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Illumina [~ 598000] |
CNV | N |
Mapped trait | anorexia nervosa |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004215 |
Study accession | GCST000873 |