SNP Detail For rs6782029
1.Mapping Information
Human SNP ID rs6782029
Human chromosome chr3
Human SNP position 11634315
Pig chromosome chr13
Pig SNP position 74986527
2.Annotation Information
PubMed ID21079607
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/21079607
StudyA genome-wide association study on common SNPs and rare CNVs in anorexia nervosa.
Disease/TraitAnorexia nervosa
Initial sample1,033 European ancestry cases, 3,733 European ancestry controls
Replication sampleNA
Region3p25.2
Chromosome idchr3
Chromosome position11634315
Reported geneVGLL4
Mapped geneVGLL4
Upstream gene id
Downstream gene id
SNP gene ids9686
Upstream gene distance
Downstream gene distance
SNP risk allelers6782029-?
SNPsrs6782029
Merged0
SNP id current6782029
Contextintron_variant
Intergenic0
Allele frequency0.24
P value0.000009
Pvalue mlog5.04575749056067
P value text
Or beta
%95 Ci
PlatformIllumina [~ 598000]
CNVN
Mapped traitanorexia nervosa
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004215
Study accessionGCST000873