SNP Detail For rs6772112
1.Mapping Information
Human SNP ID rs6772112
Human chromosome chr3
Human SNP position 11600061
Pig chromosome chr13
Pig SNP position 74955724
2.Annotation Information
PubMed ID25429064
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25429064
StudyMeta-analysis of genome-wide association studies of adult height in East Asians identifies 17 novel loci.
Disease/TraitHeight
Initial sample36,227 East Asian ancestry individuals
Replication sample57,699 East Asian ancestry individuals
Region3p25.2
Chromosome idchr3
Chromosome position11600061
Reported geneVGLL4
Mapped geneVGLL4
Upstream gene id
Downstream gene id
SNP gene ids9686
Upstream gene distance
Downstream gene distance
SNP risk allelers6772112-T
SNPsrs6772112
Merged0
SNP id current6772112
Contextintron_variant
Intergenic0
Allele frequency0.88
P value0.00000008
Pvalue mlog7.09691001300805
P value text
Or beta0.038
%95 Ci[0.022-0.054] unit increase
PlatformAffymetrix, Illumina [2704730] (imputed)
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST002702