SNP Detail For rs6767049
1.Mapping Information
Human SNP ID rs6767049
Human chromosome chr3
Human SNP position 20179220
Pig chromosome chr13
Pig SNP position 8099381
2.Annotation Information
PubMed ID22365631
JournalBiol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/22365631
StudyGenome-wide association study of temperament in bipolar disorder reveals significant associations with three novel Loci.
Disease/TraitTemperament (bipolar disorder)
Initial sample1,263 European ancestry cases, 1,434 European ancestry controls
Replication sampleNA
Region3p24.3
Chromosome idchr3
Chromosome position20179220
Reported geneSGOL1
Mapped geneSGOL1-AS1, SGOL1
Upstream gene id
Downstream gene id
SNP gene ids100874028, 151648
Upstream gene distance
Downstream gene distance
SNP risk allelers6767049-?
SNPsrs6767049
Merged0
SNP id current6767049
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000002
Pvalue mlog5.69897000433601
P value text(Dysthymic)
Or beta0.77
%95 Ci[NR] unit decrease
PlatformAffymetrix [703012]
CNVN
Mapped traitbehavior or behavioral disorder measurement, personality trait, bipolar disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004782, http://www.ebi.ac.uk/efo/EFO_0004365, http://www.ebi.ac.uk/efo/EFO_0000289
Study accessionGCST001419