SNP Detail For rs6764388
1.Mapping Information
Human SNP ID rs6764388
Human chromosome chr3
Human SNP position 65341207
Pig chromosome chr13
Pig SNP position 51665977
2.Annotation Information
PubMed ID23322567
JournalInvest Ophthalmol Vis Sci
Linkwww.ncbi.nlm.nih.gov/pubmed/23322567
StudyIdentification of a candidate gene for astigmatism.
Disease/TraitCorneal astigmatism
Initial sample22,100 European ancestry individuals
Replication sample
Region3p14.1
Chromosome idchr3
Chromosome position65341207
Reported geneNR
Mapped geneMAGI1
Upstream gene id
Downstream gene id
SNP gene ids9223
Upstream gene distance
Downstream gene distance
SNP risk allelers6764388-T
SNPsrs6764388
Merged0
SNP id current6764388
Contextintergenic_variant
Intergenic0
Allele frequency
P value0.000006
Pvalue mlog5.22184874961635
P value text
Or beta0.046
%95 Ci[NR] unit increase
PlatformAffymetrix, Illumina [2800000] (imputed)
CNVN
Mapped traitAstigmatism
Mapped trait URIhttp://purl.obolibrary.org/obo/HP_0000483
Study accessionGCST001819