SNP Detail For rs6764132
1.Mapping Information
Human SNP ID rs6764132
Human chromosome chr3
Human SNP position 39747400
Pig chromosome chr13
Pig SNP position 26597160
2.Annotation Information
PubMed ID26718567
JournalNeurology
Linkwww.ncbi.nlm.nih.gov/pubmed/26718567
StudyShared genetic susceptibility of vascular-related biomarkers with ischemic and recurrent stroke.
Disease/TraitThrombomodulin levels in ischemic stroke
Initial sampleup to 1,725 European ancestry cases, up to 258 African ancestry cases, up to 117 cases
Replication sampleNA
Region3p22.1
Chromosome idchr3
Chromosome position39747400
Reported geneNR
Mapped geneNFU1P1 - LOC105377039
Upstream gene id100132681
Downstream gene id105377039
SNP gene ids
Upstream gene distance102578
Downstream gene distance31254
SNP risk allelers6764132-?
SNPsrs6764132
Merged
SNP id current6764132
Contextregulatory_region_variant
Intergenic1
Allele frequencyNR
P value0.0000009
Pvalue mlog6.04575749056067
P value text
Or beta
%95 Ci
PlatformIllumina [7500450] (imputed)
CNVN
Mapped traitIschemic stroke
Mapped trait URIhttp://purl.obolibrary.org/obo/HP_0002140
Study accessionGCST003234