Human SNP ID | rs6759556 |
---|---|
Human chromosome | chr2 |
Human SNP position | 102135190 |
Pig chromosome | chr3 |
Pig SNP position | 54788137 |
PubMed ID | 25378659 |
---|---|
Journal | J Lipid Res |
Link | www.ncbi.nlm.nih.gov/pubmed/25378659 |
Study | Genetic Loci Associated with Circulating Levels of Very Long-Chain Saturated Fatty Acids. |
Disease/Trait | Very long-chain saturated fatty acid levels (fatty acid 20:0) |
Initial sample | 10,129 European ancestry individuals |
Replication sample | NA |
Region | 2q12.1 |
Chromosome id | chr2 |
Chromosome position | 102135190 |
Reported gene | IL1R1 |
Mapped gene | IL1R1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 3554 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs6759556-A |
SNPs | rs6759556 |
Merged | 0 |
SNP id current | 6759556 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | |
Or beta | 4.478 |
%95 Ci | [NR] Z score decrease |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | very long-chain saturated fatty acid measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006796 |
Study accession | GCST002690 |