SNP Detail For rs6757804
1.Mapping Information
Human SNP ID rs6757804
Human chromosome chr2
Human SNP position 150779318
Pig chromosome chr15
Pig SNP position 559443
2.Annotation Information
PubMed ID23472165
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23472165
StudyGenome-wide association study link novel loci to endometriosis.
Disease/TraitEndometriosis
Initial sample1,514 European ancestry casses, 12,660 European ancestry controls
Replication sample505 European ancestry cases, 1,811 European ancestry controls
Region2q23.3
Chromosome idchr2
Chromosome position150779318
Reported geneRBM43, RND3
Mapped geneLOC101929282 - LOC105373686
Upstream gene id101929282
Downstream gene id105373686
SNP gene ids
Upstream gene distance143961
Downstream gene distance264518
SNP risk allelers6757804-G
SNPsrs6757804
Merged0
SNP id current6757804
Contextintergenic_variant
Intergenic1
Allele frequency0.401
P value0.00000006
Pvalue mlog7.22184874961635
P value text
Or beta1.2
%95 Ci[1.13-1.29]
PlatformIllumina [580699]
CNVN
Mapped traitendometriosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001065
Study accessionGCST001894