Human SNP ID | rs6757804 |
---|---|
Human chromosome | chr2 |
Human SNP position | 150779318 |
Pig chromosome | chr15 |
Pig SNP position | 559443 |
PubMed ID | 23472165 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23472165 |
Study | Genome-wide association study link novel loci to endometriosis. |
Disease/Trait | Endometriosis |
Initial sample | 1,514 European ancestry casses, 12,660 European ancestry controls |
Replication sample | 505 European ancestry cases, 1,811 European ancestry controls |
Region | 2q23.3 |
Chromosome id | chr2 |
Chromosome position | 150779318 |
Reported gene | RBM43, RND3 |
Mapped gene | LOC101929282 - LOC105373686 |
Upstream gene id | 101929282 |
Downstream gene id | 105373686 |
SNP gene ids | |
Upstream gene distance | 143961 |
Downstream gene distance | 264518 |
SNP risk allele | rs6757804-G |
SNPs | rs6757804 |
Merged | 0 |
SNP id current | 6757804 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.401 |
P value | 0.00000006 |
Pvalue mlog | 7.22184874961635 |
P value text | |
Or beta | 1.2 |
%95 Ci | [1.13-1.29] |
Platform | Illumina [580699] |
CNV | N |
Mapped trait | endometriosis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001065 |
Study accession | GCST001894 |