SNP Detail For rs6754521
1.Mapping Information
Human SNP ID rs6754521
Human chromosome chr2
Human SNP position 201994894
Pig chromosome chr15
Pig SNP position 117025135
2.Annotation Information
PubMed ID22952603
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/22952603
StudyGenome-wide association study of d-amphetamine response in healthy volunteers identifies putative associations, including cadherin 13 (CDH13).
Disease/TraitResponse to amphetamines
Initial sample1 American Indian ancestry individual, 18 African American individuals, 10 Asian ancestry individuals, 325 European ancestry individuals, 17 Hispanic individuals, 10 individuals
Replication sampleNA
Region2q33.1
Chromosome idchr2
Chromosome position201994894
Reported geneintergenic
Mapped geneCDK15 - FZD7
Upstream gene id65061
Downstream gene id8324
SNP gene ids
Upstream gene distance99344
Downstream gene distance39693
SNP risk allelers6754521-?
SNPsrs6754521
Merged0
SNP id current6754521
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000005
Pvalue mlog5.30102999566398
P value text(SF10)
Or beta
%95 Ci
PlatformAffymetrix [5476100] (imputed)
CNVN
Mapped traitresponse to drug
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0042493
Study accessionGCST001651