SNP Detail For rs6752828
1.Mapping Information
Human SNP ID rs6752828
Human chromosome chr2
Human SNP position 79960843
Pig chromosome chr3
Pig SNP position 67009311
2.Annotation Information
PubMed ID25673413
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/25673413
StudyGenetic studies of body mass index yield new insights for obesity biology.
Disease/TraitBody mass index
Initial sampleup to 104,666 European ancestry male individuals, up to 132,115 European ancestry female individuals, 370 African American male individuals, 517 African American female individuals, 512 Hispanic male individuals, 764 Hispanic female individuals
Replication sampleup to 48,274 European ancestry male individuals, up to 39,864 European ancestry female individuals, 2,441 African American or Afro-Caribbean male individuals, 6,314 African American or Afro-Caribbean female individuals, 919 Filipino male individuals, 828
Region2p12
Chromosome idchr2
Chromosome position79960843
Reported geneCTNNA2
Mapped geneCTNNA2
Upstream gene id
Downstream gene id
SNP gene ids1496
Upstream gene distance
Downstream gene distance
SNP risk allelers6752828-C
SNPsrs6752828
Merged0
SNP id current6752828
Contextintron_variant
Intergenic0
Allele frequency0.461
P value0.0000003
Pvalue mlog6.52287874528033
P value text(EA, men)
Or beta0.021
%95 Ci[0.013-0.029] kg/m2 increase
PlatformAffymetrix, Illumina [2550021]
CNVN
Mapped traitbody mass index
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004340
Study accessionGCST002783