SNP Detail For rs6741148
1.Mapping Information
Human SNP ID rs6741148
Human chromosome chr2
Human SNP position 38050689
Pig chromosome chr3
Pig SNP position 108466485
2.Annotation Information
PubMed ID20932654
JournalInt J Radiat Oncol Biol Phys
Linkwww.ncbi.nlm.nih.gov/pubmed/20932654
StudyGenome-wide association study to identify single nucleotide polymorphisms (SNPs) associated with the development of erectile dysfunction in African-American men after radiotherapy for prostate cancer.
Disease/TraitErectile dysfunction and prostate cancer treatment
Initial sample27 African American cases, 52 African American controls
Replication sampleNA
Region2p22.2
Chromosome idchr2
Chromosome position38050689
Reported geneFAM82A1
Mapped geneRMDN2
Upstream gene id
Downstream gene id
SNP gene ids151393
Upstream gene distance
Downstream gene distance
SNP risk allelers6741148-?
SNPsrs6741148
Merged0
SNP id current6741148
Contextintron_variant
Intergenic0
Allele frequency0.33
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta5.2
%95 Ci[NR]
PlatformAffymetrix [512497]
CNVN
Mapped traitresponse to radiation, prostate carcinoma, erectile dysfunction
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0009314, http://www.ebi.ac.uk/efo/EFO_0001663, http://www.ebi.ac.uk/efo/EFO_0004234
Study accessionGCST000824