Human SNP ID | rs6738181 |
---|---|
Human chromosome | chr2 |
Human SNP position | 204263298 |
Pig chromosome | chr15 |
Pig SNP position | 119063444 |
PubMed ID | 22881374 |
---|---|
Journal | Ann Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22881374 |
Study | Genome-wide association and linkage study in the Amish detects a novel candidate late-onset Alzheimer disease gene. |
Disease/Trait | Alzheimer__s disease (late onset) |
Initial sample | 109 Amish cases, 689 Amish controls |
Replication sample | NA |
Region | 2q33.3 |
Chromosome id | chr2 |
Chromosome position | 204263298 |
Reported gene | intergenic |
Mapped gene | ICOS - LOC105373845 |
Upstream gene id | 29851 |
Downstream gene id | 105373845 |
SNP gene ids | |
Upstream gene distance | 301719 |
Downstream gene distance | 210514 |
SNP risk allele | rs6738181-A |
SNPs | rs6738181 |
Merged | 0 |
SNP id current | 6738181 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.19 |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix [614963] |
CNV | N |
Mapped trait | Alzheimers disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000249 |
Study accession | GCST001658 |