SNP Detail For rs6735786
1.Mapping Information
Human SNP ID rs6735786
Human chromosome chr2
Human SNP position 103153780
Pig chromosome chr3
Pig SNP position 53523589
2.Annotation Information
PubMed ID19079262
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19079262
StudyNew sequence variants associated with bone mineral density.
Disease/TraitBone mineral density (hip)
Initial sample6,865 European ancestry individuals
Replication sample8,510 European ancestry individuals
Region2q12.1
Chromosome idchr2
Chromosome position103153780
Reported geneNR
Mapped geneLOC105373519 - LOC105373520
Upstream gene id105373519
Downstream gene id105373520
SNP gene ids
Upstream gene distance169260
Downstream gene distance658331
SNP risk allelers6735786-C
SNPsrs6735786
Merged0
SNP id current6735786
Contextintron_variant
Intergenic1
Allele frequency0.64
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta0.07
%95 Ci[0.04-0.09] s.d. decrease
PlatformIllumina [305051]
CNVN
Mapped traitbone density
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003923
Study accessionGCST000297