SNP Detail For rs6730148
1.Mapping Information
Human SNP ID rs6730148
Human chromosome chr2
Human SNP position 3701381
Pig chromosome chr3
Pig SNP position 140406421
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region2p25.3
Chromosome idchr2
Chromosome position3701381
Reported geneALLC, DCDC2C
Mapped geneLOC105373393, ALLC
Upstream gene id
Downstream gene id
SNP gene ids105373393, 55821
Upstream gene distance
Downstream gene distance
SNP risk allelers6730148-G
SNPsrs6730148
Merged0
SNP id current6730148
Contextintron_variant
Intergenic0
Allele frequency0.074
P value0.000002
Pvalue mlog5.69897000433601
P value text(Cortisol )
Or beta0.02
%95 Ci[NR] ng/mL increase
PlatformIllumina [899892]
CNVN
Mapped traitcortisol secretion measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004642
Study accessionGCST001762